Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.55□□□□□ -0.4
ClppO88696 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ClppO88696 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ClppO88696 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.55□□□□□ -0.4
ClppO88696 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Gm37008-201ENSMUST00000195712 319 ntBASIC12.55□□□□□ -0.4
ClppO88696 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.55□□□□□ -0.4
ClppO88696 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.55□□□□□ -0.4
ClppO88696 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.55□□□□□ -0.4
ClppO88696 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.55□□□□□ -0.4
ClppO88696 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.55□□□□□ -0.4
ClppO88696 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ClppO88696 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClppO88696 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
ClppO88696 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.54□□□□□ -0.4
ClppO88696 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.54□□□□□ -0.4
ClppO88696 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ClppO88696 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.54□□□□□ -0.4
ClppO88696 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
ClppO88696 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ClppO88696 Gm38266-201ENSMUST00000194931 421 ntBASIC12.54□□□□□ -0.4
ClppO88696 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.54□□□□□ -0.4
ClppO88696 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.54□□□□□ -0.4
ClppO88696 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.54□□□□□ -0.4
ClppO88696 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.54□□□□□ -0.4
ClppO88696 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Gm10146-201ENSMUST00000072739 309 ntBASIC12.54□□□□□ -0.4
ClppO88696 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.54□□□□□ -0.4
ClppO88696 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.54□□□□□ -0.4
ClppO88696 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ClppO88696 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.54□□□□□ -0.4
ClppO88696 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClppO88696 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.53□□□□□ -0.4
ClppO88696 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ClppO88696 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ClppO88696 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.53□□□□□ -0.4
ClppO88696 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.53□□□□□ -0.4
ClppO88696 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.53□□□□□ -0.4
ClppO88696 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.53□□□□□ -0.4
ClppO88696 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms