Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cops4O88544 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.8□□□□□ -0.52
Cops4O88544 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.8□□□□□ -0.52
Cops4O88544 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.8□□□□□ -0.52
Cops4O88544 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm27306-201ENSMUST00000183970 107 ntBASIC11.8□□□□□ -0.52
Cops4O88544 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.8□□□□□ -0.52
Cops4O88544 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.8□□□□□ -0.52
Cops4O88544 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cops4O88544 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.79□□□□□ -0.52
Cops4O88544 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cops4O88544 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Cops4O88544 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cops4O88544 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.79□□□□□ -0.52
Cops4O88544 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.79□□□□□ -0.52
Cops4O88544 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.79□□□□□ -0.52
Cops4O88544 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Cops4O88544 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Gm44872-201ENSMUST00000207864 420 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.79□□□□□ -0.52
Cops4O88544 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cops4O88544 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cops4O88544 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.79□□□□□ -0.52
Cops4O88544 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.79□□□□□ -0.52
Cops4O88544 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops4O88544 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cops4O88544 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cops4O88544 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms