Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.17■□□□□ 0.02
Hdac1O09106 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.17■□□□□ 0.02
Hdac1O09106 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Hdac1O09106 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Snord83b-201ENSMUST00000104546 94 ntBASIC15.17■□□□□ 0.02
Hdac1O09106 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Gm8598-201ENSMUST00000221184 836 ntBASIC15.17■□□□□ 0.02
Hdac1O09106 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.17■□□□□ 0.02
Hdac1O09106 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hdac1O09106 Gm12928-201ENSMUST00000117115 573 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.16■□□□□ 0.02
Hdac1O09106 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 Gm16296-201ENSMUST00000159905 325 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
Hdac1O09106 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 Mir6392-201ENSMUST00000184924 108 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 Gm37917-201ENSMUST00000194711 392 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac1O09106 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.16■□□□□ 0.02
Hdac1O09106 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac1O09106 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.15■□□□□ 0.02
Hdac1O09106 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Map1b-203ENSMUST00000223725 2669 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Hdac1O09106 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC15.15■□□□□ 0.02
Hdac1O09106 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm8805-201ENSMUST00000117848 313 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Gm15920-201ENSMUST00000118998 402 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Hdac1O09106 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.15■□□□□ 0.02
Hdac1O09106 Gm35960-201ENSMUST00000202712 767 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.15■□□□□ 0.02
Hdac1O09106 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.15■□□□□ 0.02
Hdac1O09106 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac1O09106 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.15■□□□□ 0.02
Hdac1O09106 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Hdac1O09106 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hdac1O09106 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hdac1O09106 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms