Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.15□□□□□ -0.3
Trove2O08848 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trove2O08848 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.15□□□□□ -0.3
Trove2O08848 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.15□□□□□ -0.3
Trove2O08848 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Trove2O08848 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trove2O08848 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.14□□□□□ -0.31
Trove2O08848 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trove2O08848 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trove2O08848 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trove2O08848 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trove2O08848 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trove2O08848 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Gm5279-201ENSMUST00000199575 745 ntBASIC13.14□□□□□ -0.31
Trove2O08848 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.14□□□□□ -0.31
Trove2O08848 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.14□□□□□ -0.31
Trove2O08848 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.14□□□□□ -0.31
Trove2O08848 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trove2O08848 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trove2O08848 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trove2O08848 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trove2O08848 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trove2O08848 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.13□□□□□ -0.31
Trove2O08848 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trove2O08848 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trove2O08848 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trove2O08848 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.13□□□□□ -0.31
Trove2O08848 Gm12485-201ENSMUST00000119641 291 ntBASIC13.13□□□□□ -0.31
Trove2O08848 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.13□□□□□ -0.31
Trove2O08848 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.13□□□□□ -0.31
Trove2O08848 Gm16215-201ENSMUST00000161990 637 ntBASIC13.13□□□□□ -0.31
Trove2O08848 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trove2O08848 Gm10576-201ENSMUST00000191927 825 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms