Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Gm28071-201ENSMUST00000190355 478 ntBASIC19■□□□□ 0.63
Pcf11G3X9Z4 Gm45118-201ENSMUST00000208928 825 ntBASIC19■□□□□ 0.63
Pcf11G3X9Z4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 AC125486.1-201ENSMUST00000218701 320 ntBASIC19■□□□□ 0.63
Pcf11G3X9Z4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcf11G3X9Z4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Gm17931-201ENSMUST00000208132 634 ntBASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcf11G3X9Z4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm9072-201ENSMUST00000218390 1514 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12616-201ENSMUST00000118594 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm15595-201ENSMUST00000120840 961 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12624-201ENSMUST00000177615 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12621-201ENSMUST00000177760 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12615-201ENSMUST00000177970 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12622-201ENSMUST00000177975 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12627-201ENSMUST00000178412 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12625-201ENSMUST00000179122 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12614-201ENSMUST00000179586 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm12613-201ENSMUST00000180323 382 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm45909-201ENSMUST00000212413 1031 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm7049-201ENSMUST00000223520 1712 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm37131-201ENSMUST00000192502 1561 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm5419-201ENSMUST00000119301 527 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm14247-201ENSMUST00000120950 237 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm4482-201ENSMUST00000200876 742 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Gm9785-201ENSMUST00000062642 1006 ntBASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcf11G3X9Z4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms