Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm27920-201ENSMUST00000183953 96 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm27300-201ENSMUST00000184085 97 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm27335-201ENSMUST00000184758 97 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm44124-201ENSMUST00000204159 472 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Btrc-209ENSMUST00000224478 2194 ntBASIC13.1□□□□□ -0.31
Trim55G3X8Y1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 AA543401-201ENSMUST00000164248 1269 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm18027-201ENSMUST00000218947 619 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms