Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ccdc188F6WEU2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm15003-201ENSMUST00000118884 446 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm12453-201ENSMUST00000121981 331 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm5805-201ENSMUST00000072779 456 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Mir339-201ENSMUST00000083659 96 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc188F6WEU2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm24398-201ENSMUST00000157870 109 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Mir6407-201ENSMUST00000184510 101 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm43854-201ENSMUST00000200418 394 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc188F6WEU2 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms