Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
C530025M09RikF6RGA8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm43051-201ENSMUST00000201096 2678 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm12291-201ENSMUST00000121627 311 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm18307-201ENSMUST00000206864 949 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm5867-201ENSMUST00000063197 592 ntBASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
C530025M09RikF6RGA8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Gm5053-201ENSMUST00000208361 1678 ntBASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
C530025M09RikF6RGA8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms