Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.46□□□□□ -0.58
Shank1D3YZU1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm13045-201ENSMUST00000119019 712 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm13492-201ENSMUST00000119772 665 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm17040-202ENSMUST00000170597 889 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gm37666-201ENSMUST00000194110 866 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.45□□□□□ -0.58
Shank1D3YZU1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shank1D3YZU1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.44□□□□□ -0.58
Shank1D3YZU1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.44□□□□□ -0.58
Shank1D3YZU1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm15131-201ENSMUST00000119124 595 ntBASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.44□□□□□ -0.58
Shank1D3YZU1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shank1D3YZU1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.43□□□□□ -0.58
Shank1D3YZU1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shank1D3YZU1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms