Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.09□□□□□ -0.47
Phf11cB4XVP9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Phf11cB4XVP9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Phf11cB4XVP9 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.08□□□□□ -0.47
Phf11cB4XVP9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Phf11cB4XVP9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm14057-201ENSMUST00000120631 482 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf11cB4XVP9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.07□□□□□ -0.48
Phf11cB4XVP9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.07□□□□□ -0.48
Phf11cB4XVP9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Phf11cB4XVP9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms