Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.51□□□□□ -0.41
Chd3B1AR17 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.51□□□□□ -0.41
Chd3B1AR17 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Chd3B1AR17 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chd3B1AR17 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.51□□□□□ -0.41
Chd3B1AR17 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd3B1AR17 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chd3B1AR17 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm14130-201ENSMUST00000118417 987 ntBASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm16570-201ENSMUST00000161951 436 ntBASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm27046-201ENSMUST00000182160 463 ntBASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.5□□□□□ -0.41
Chd3B1AR17 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm44405-201ENSMUST00000198952 126 ntBASIC12.5□□□□□ -0.41
Chd3B1AR17 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd3B1AR17 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd3B1AR17 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd3B1AR17 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm13665-201ENSMUST00000120830 528 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm13813-201ENSMUST00000120998 787 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm31256-201ENSMUST00000194705 506 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm24830-201ENSMUST00000102024 166 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm11597-201ENSMUST00000121423 964 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm26461-201ENSMUST00000175064 290 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm25890-201ENSMUST00000177643 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm22614-201ENSMUST00000178300 165 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm37466-201ENSMUST00000195692 652 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd3B1AR17 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.49□□□□□ -0.41
Chd3B1AR17 Gm22042-201ENSMUST00000082989 165 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms