Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm13296-201ENSMUST00000117854 997 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm11675-201ENSMUST00000121873 832 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm8712-201ENSMUST00000221090 701 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Col6a4A2AX52 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.77□□□□□ -0.68
Col6a4A2AX52 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.77□□□□□ -0.68
Col6a4A2AX52 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm11930-201ENSMUST00000117788 190 ntBASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm37201-201ENSMUST00000191845 523 ntBASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm44545-201ENSMUST00000208262 746 ntBASIC10.77□□□□□ -0.69
Col6a4A2AX52 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.77□□□□□ -0.69
Col6a4A2AX52 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Col6a4A2AX52 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm13875-201ENSMUST00000120162 282 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms