Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Gm14760-201ENSMUST00000121831 999 ntBASIC14.12□□□□□ -0.15
Scn3aA2ASI5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Gm43138-201ENSMUST00000199123 708 ntBASIC14.12□□□□□ -0.15
Scn3aA2ASI5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Gm17812-201ENSMUST00000204935 318 ntBASIC14.12□□□□□ -0.15
Scn3aA2ASI5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn3aA2ASI5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm18753-201ENSMUST00000201000 566 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gm26035-201ENSMUST00000083065 308 ntBASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn3aA2ASI5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm24934-201ENSMUST00000103764 111 ntBASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm23949-201ENSMUST00000104027 127 ntBASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm9230-201ENSMUST00000188228 532 ntBASIC14.1□□□□□ -0.15
Scn3aA2ASI5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms