Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm5749-201ENSMUST00000210673 1090 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 AC174797.2-201ENSMUST00000225835 165 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm43598-201ENSMUST00000202482 2479 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm13142-201ENSMUST00000117213 1453 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm18198-201ENSMUST00000204986 1551 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Mir598-201ENSMUST00000102094 79 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm18561-201ENSMUST00000206027 804 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm5419-201ENSMUST00000119301 527 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm23479-201ENSMUST00000158876 122 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm16296-201ENSMUST00000159905 325 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm26134-201ENSMUST00000178484 110 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm27444-201ENSMUST00000184157 137 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm45575-201ENSMUST00000210283 548 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Olfr1425-201ENSMUST00000087828 939 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm28847-201ENSMUST00000186778 700 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC166344.1-201ENSMUST00000223745 674 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm22920-201ENSMUST00000102175 109 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm26313-201ENSMUST00000157770 308 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm42937-201ENSMUST00000197360 752 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm42689-201ENSMUST00000202403 404 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC154213.1-201ENSMUST00000228234 583 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gm9025-201ENSMUST00000122415 1575 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ubr4A2AN08 AC162938.1-201ENSMUST00000213140 2323 ntBASIC6.54□□□□□ -1.36
Ubr4A2AN08 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ubr4A2AN08 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ubr4A2AN08 Gm13094-201ENSMUST00000117930 409 ntBASIC6.53□□□□□ -1.36
Ubr4A2AN08 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ubr4A2AN08 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ubr4A2AN08 Gm22379-201ENSMUST00000157480 131 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms