Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Gm22042-201ENSMUST00000082989 165 ntBASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Gm26232-201ENSMUST00000083360 166 ntBASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Gm24136-201ENSMUST00000083374 165 ntBASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Gm26110-201ENSMUST00000083971 165 ntBASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc39aA2ACP1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc39aA2ACP1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm15276-201ENSMUST00000145953 498 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.52□□□□□ -0.41
Ttc39aA2ACP1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm12291-201ENSMUST00000121627 311 ntBASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm2546-201ENSMUST00000182630 991 ntBASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc39aA2ACP1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms