Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm18363-201ENSMUST00000221671 730 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim39Q9ESN2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim39Q9ESN2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim39Q9ESN2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms