Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc89Q9DA73 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.02□□□□□ -0.16
Ccdc89Q9DA73 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Gm17794-201ENSMUST00000220252 955 ntBASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.02□□□□□ -0.17
Ccdc89Q9DA73 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm12203-201ENSMUST00000118235 598 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm13369-201ENSMUST00000119442 987 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm12209-201ENSMUST00000120089 596 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm27892-201ENSMUST00000185017 106 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Gm9794-201ENSMUST00000202370 423 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc89Q9DA73 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14□□□□□ -0.17
Ccdc89Q9DA73 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Gm14704-201ENSMUST00000120300 874 ntBASIC14□□□□□ -0.17
Ccdc89Q9DA73 Gm16479-201ENSMUST00000121706 932 ntBASIC14□□□□□ -0.17
Ccdc89Q9DA73 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc89Q9DA73 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc89Q9DA73 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms