Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
PudpQ9D5U5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.4□□□□□ -0.42
PudpQ9D5U5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.4□□□□□ -0.42
PudpQ9D5U5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.4□□□□□ -0.42
PudpQ9D5U5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
PudpQ9D5U5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PudpQ9D5U5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm15770-201ENSMUST00000117498 584 ntBASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm11478-201ENSMUST00000117851 599 ntBASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm26464-201ENSMUST00000157094 305 ntBASIC12.39□□□□□ -0.43
PudpQ9D5U5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.39□□□□□ -0.43
PudpQ9D5U5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PudpQ9D5U5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm12138-201ENSMUST00000122180 951 ntBASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm27701-201ENSMUST00000184498 110 ntBASIC12.38□□□□□ -0.43
PudpQ9D5U5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm45384-201ENSMUST00000210451 277 ntBASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.38□□□□□ -0.43
PudpQ9D5U5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PudpQ9D5U5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms