Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.03■□□□□ -0
Smc3Q9CW03 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Smc3Q9CW03 Gm27437-201ENSMUST00000183429 107 ntBASIC15.03■□□□□ -0
Smc3Q9CW03 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.03■□□□□ -0
Smc3Q9CW03 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smc3Q9CW03 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smc3Q9CW03 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.03■□□□□ -0
Smc3Q9CW03 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Smc3Q9CW03 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Smc3Q9CW03 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc3Q9CW03 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.02■□□□□ -0
Smc3Q9CW03 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.02■□□□□ -0
Smc3Q9CW03 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smc3Q9CW03 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Gm12291-201ENSMUST00000121627 311 ntBASIC15.02■□□□□ -0
Smc3Q9CW03 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Smc3Q9CW03 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.02■□□□□ -0
Smc3Q9CW03 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.02■□□□□ -0
Smc3Q9CW03 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.02■□□□□ -0
Smc3Q9CW03 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Smc3Q9CW03 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc3Q9CW03 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc3Q9CW03 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.01□□□□□ -0.01
Smc3Q9CW03 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.01□□□□□ -0.01
Smc3Q9CW03 Gm45668-201ENSMUST00000211271 493 ntBASIC15.01□□□□□ -0.01
Smc3Q9CW03 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.01□□□□□ -0.01
Smc3Q9CW03 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.01□□□□□ -0.01
Smc3Q9CW03 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc3Q9CW03 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15□□□□□ -0.01
Smc3Q9CW03 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms