Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm5566-201ENSMUST00000116118 459 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm9719-201ENSMUST00000162765 543 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Mir3113-201ENSMUST00000175478 76 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm9824-201ENSMUST00000178707 561 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm4804-201ENSMUST00000182234 999 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm10819-201ENSMUST00000099988 561 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RTRAFQ9CQE8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm18733-201ENSMUST00000173950 856 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms