Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ska1Q9CPV1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm15371-201ENSMUST00000117057 784 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm15376-201ENSMUST00000122258 783 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ska1Q9CPV1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms