Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Gm15920-201ENSMUST00000118998 402 ntBASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.55□□□□□ -0.56
Krt88Q9CPR6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.55□□□□□ -0.56
Krt88Q9CPR6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Krt88Q9CPR6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Gm6447-201ENSMUST00000118905 835 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Auts2-212ENSMUST00000178555 309 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Gm44872-201ENSMUST00000207864 420 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Gm6888-201ENSMUST00000221983 706 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Krt88Q9CPR6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms