Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gtf2a1Q99PM3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gtf2a1Q99PM3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Gm13126-201ENSMUST00000117079 3063 ntBASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gtf2a1Q99PM3 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Gm13437-201ENSMUST00000122434 1981 ntBASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gtf2a1Q99PM3 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
Gtf2a1Q99PM3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms