Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msh4Q99MT2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.48□□□□□ -0.41
Msh4Q99MT2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Gm37922-201ENSMUST00000195596 455 ntBASIC12.48□□□□□ -0.41
Msh4Q99MT2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.48□□□□□ -0.41
Msh4Q99MT2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
Msh4Q99MT2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm13369-201ENSMUST00000119442 987 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm16177-201ENSMUST00000120728 718 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm4271-201ENSMUST00000174444 973 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm43818-201ENSMUST00000200605 466 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.47□□□□□ -0.41
Msh4Q99MT2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msh4Q99MT2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms