Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm13888-201ENSMUST00000119148 422 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm11941-201ENSMUST00000119904 610 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm37444-201ENSMUST00000193605 439 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.72■□□□□ 0.11
RtcbQ99LF4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.72■□□□□ 0.11
RtcbQ99LF4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm23251-201ENSMUST00000103773 110 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm12029-201ENSMUST00000120073 832 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm8194-201ENSMUST00000159783 859 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm18038-201ENSMUST00000197900 485 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm21811-201ENSMUST00000096485 930 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.71■□□□□ 0.11
RtcbQ99LF4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RtcbQ99LF4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RtcbQ99LF4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RtcbQ99LF4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RtcbQ99LF4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RtcbQ99LF4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RtcbQ99LF4 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.71■□□□□ 0.1
RtcbQ99LF4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RtcbQ99LF4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms