Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm13296-201ENSMUST00000117854 997 ntBASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm13461-201ENSMUST00000120980 662 ntBASIC14.73□□□□□ -0.05
Rfc4Q99J62 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm8913-201ENSMUST00000209491 641 ntBASIC14.72□□□□□ -0.05
Rfc4Q99J62 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfc4Q99J62 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.71□□□□□ -0.05
Rfc4Q99J62 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gm14921-201ENSMUST00000118643 908 ntBASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gm12291-201ENSMUST00000121627 311 ntBASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gzmn-202ENSMUST00000225535 989 ntBASIC14.71□□□□□ -0.05
Rfc4Q99J62 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfc4Q99J62 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfc4Q99J62 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms