Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
StrcQ8VIM6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.81□□□□□ -0.04
StrcQ8VIM6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.81□□□□□ -0.04
StrcQ8VIM6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.81□□□□□ -0.04
StrcQ8VIM6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
StrcQ8VIM6 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm18711-201ENSMUST00000199341 750 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm18968-201ENSMUST00000221319 862 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm18201-201ENSMUST00000174735 875 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Gm26035-201ENSMUST00000083065 308 ntBASIC14.8□□□□□ -0.04
StrcQ8VIM6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
StrcQ8VIM6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.79□□□□□ -0.04
StrcQ8VIM6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Mir6407-201ENSMUST00000184510 101 ntBASIC14.79□□□□□ -0.04
StrcQ8VIM6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.79□□□□□ -0.04
StrcQ8VIM6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
StrcQ8VIM6 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.79□□□□□ -0.04
StrcQ8VIM6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
StrcQ8VIM6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms