Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm29199-201ENSMUST00000187766 775 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm38317-201ENSMUST00000195564 343 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm18056-201ENSMUST00000207670 568 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm18061-201ENSMUST00000208350 562 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm18063-201ENSMUST00000208529 568 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm18052-201ENSMUST00000208750 559 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.67□□□□□ -0.22
TraipQ8VIG6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.67□□□□□ -0.22
TraipQ8VIG6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm15547-201ENSMUST00000122152 333 ntBASIC13.66□□□□□ -0.22
TraipQ8VIG6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.66□□□□□ -0.22
TraipQ8VIG6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TraipQ8VIG6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm23270-201ENSMUST00000104055 131 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms