Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Gm13123-201ENSMUST00000122173 492 ntBASIC12.28□□□□□ -0.44
Lsm1Q8VC85 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Gm28911-201ENSMUST00000188837 117 ntBASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.28□□□□□ -0.44
Lsm1Q8VC85 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Mir339-201ENSMUST00000083659 96 ntBASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm1Q8VC85 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm1Q8VC85 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm5866-201ENSMUST00000177881 973 ntBASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Proscos-202ENSMUST00000178990 666 ntBASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm38671-201ENSMUST00000200573 130 ntBASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm1Q8VC85 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm10156-201ENSMUST00000122364 462 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms