Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Mir1894-201ENSMUST00000122802 81 ntBASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gm5356-201ENSMUST00000093326 615 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf8Q8VC56 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Gm5186-201ENSMUST00000218781 920 ntBASIC12.36□□□□□ -0.43
Rnf8Q8VC56 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.36□□□□□ -0.43
Rnf8Q8VC56 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf8Q8VC56 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms