Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Rpph1-201ENSMUST00000175096 319 ntBASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Gm18165-201ENSMUST00000217426 928 ntBASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Gm9385-201ENSMUST00000117563 472 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Gm10175-201ENSMUST00000086013 645 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Gm45828-201ENSMUST00000206938 1836 ntBASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc9Q8VC31 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc9Q8VC31 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms