Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm8213-201ENSMUST00000118191 441 ntBASIC12.82□□□□□ -0.36
Vps39Q8R5L3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm7287-201ENSMUST00000205267 602 ntBASIC12.82□□□□□ -0.36
Vps39Q8R5L3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps39Q8R5L3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.81□□□□□ -0.36
Vps39Q8R5L3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms