Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubqln1Q8R317 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Gm26185-201ENSMUST00000157692 266 ntBASIC12.16□□□□□ -0.46
Ubqln1Q8R317 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Gm4271-201ENSMUST00000174444 973 ntBASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.16□□□□□ -0.46
Ubqln1Q8R317 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ubqln1Q8R317 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm12291-201ENSMUST00000121627 311 ntBASIC12.15□□□□□ -0.46
Ubqln1Q8R317 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm17150-201ENSMUST00000165577 381 ntBASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm10146-201ENSMUST00000072739 309 ntBASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.15□□□□□ -0.46
Ubqln1Q8R317 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ubqln1Q8R317 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms