Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Gm16296-201ENSMUST00000159905 325 ntBASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Gm10268-201ENSMUST00000085340 555 ntBASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.08■□□□□ 0.01
Atf7Q8R0S1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atf7Q8R0S1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Atf7Q8R0S1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
Atf7Q8R0S1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atf7Q8R0S1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Gm4984-201ENSMUST00000115987 360 ntBASIC15.08■□□□□ 0
Atf7Q8R0S1 Gm1335-201ENSMUST00000121653 386 ntBASIC15.08■□□□□ 0
Atf7Q8R0S1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Gm8602-201ENSMUST00000184045 607 ntBASIC15.08■□□□□ 0
Atf7Q8R0S1 Gm7063-201ENSMUST00000186840 981 ntBASIC15.08■□□□□ 0
Atf7Q8R0S1 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.08■□□□□ 0
Atf7Q8R0S1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atf7Q8R0S1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Atf7Q8R0S1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.07■□□□□ 0
Atf7Q8R0S1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.07■□□□□ 0
Atf7Q8R0S1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gm43818-201ENSMUST00000200605 466 ntBASIC15.07■□□□□ 0
Atf7Q8R0S1 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.07■□□□□ 0
Atf7Q8R0S1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gm26035-201ENSMUST00000083065 308 ntBASIC15.07■□□□□ 0
Atf7Q8R0S1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms