Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm11628-201ENSMUST00000117568 171 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm12208-201ENSMUST00000122004 163 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm9230-201ENSMUST00000188228 532 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.42□□□□□ -0.1
Syne4Q8CII8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm12165-201ENSMUST00000117047 342 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm15515-201ENSMUST00000117827 822 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm12314-201ENSMUST00000118104 538 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm13045-201ENSMUST00000119019 712 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm13813-201ENSMUST00000120998 787 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm5616-201ENSMUST00000165252 384 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm8741-201ENSMUST00000174736 384 ntBASIC14.41□□□□□ -0.1
Syne4Q8CII8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne4Q8CII8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.4□□□□□ -0.1
Syne4Q8CII8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Gm44551-201ENSMUST00000208804 171 ntBASIC14.4□□□□□ -0.1
Syne4Q8CII8 Gm5369-201ENSMUST00000217499 588 ntBASIC14.4□□□□□ -0.1
Syne4Q8CII8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.4□□□□□ -0.1
Syne4Q8CII8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Syne4Q8CII8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms