Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Gm26083-201ENSMUST00000157904 193 ntBASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Gm22121-201ENSMUST00000175148 54 ntBASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Gm4857-201ENSMUST00000192718 785 ntBASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rbm28Q8CGC6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm24255-201ENSMUST00000104481 128 ntBASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm21769-201ENSMUST00000211922 111 ntBASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Morn2-202ENSMUST00000227729 656 ntBASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbm28Q8CGC6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm22323-201ENSMUST00000103832 109 ntBASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm14381-201ENSMUST00000122105 414 ntBASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbm28Q8CGC6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbm28Q8CGC6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms