Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tsen54Q8C2A2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm15487-201ENSMUST00000122373 465 ntBASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tsen54Q8C2A2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm14719-201ENSMUST00000121891 340 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Mir6977-201ENSMUST00000184960 64 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm21470-201ENSMUST00000187680 696 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms