Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf3Q8C120 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gm12390-201ENSMUST00000117897 397 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gm4271-201ENSMUST00000174444 973 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf3Q8C120 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf3Q8C120 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf3Q8C120 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf3Q8C120 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf3Q8C120 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf3Q8C120 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Gm16177-201ENSMUST00000120728 718 ntBASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Gm12363-201ENSMUST00000122250 668 ntBASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Gm29649-201ENSMUST00000185649 419 ntBASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf3Q8C120 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms