Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm14921-201ENSMUST00000118643 908 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm45865-201ENSMUST00000211815 945 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm18041-201ENSMUST00000218210 618 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim47Q8C0E3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm12241-201ENSMUST00000118330 726 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm4986-201ENSMUST00000119731 549 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm37489-201ENSMUST00000191883 159 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm6621-201ENSMUST00000193251 772 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm22058-201ENSMUST00000083393 310 ntBASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms