Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm8826-201ENSMUST00000193161 948 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm17937-201ENSMUST00000197908 742 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim35Q8C006 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 CU024892.1-201ENSMUST00000224869 515 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm14751-201ENSMUST00000117693 222 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm28341-201ENSMUST00000190883 472 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm2077-201ENSMUST00000195017 319 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm2451-201ENSMUST00000199447 999 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm10290-201ENSMUST00000200451 999 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 CT009600.2-201ENSMUST00000226638 481 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.15□□□□□ -0.14
Trim35Q8C006 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim35Q8C006 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim35Q8C006 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC14.15□□□□□ -0.15
Trim35Q8C006 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim35Q8C006 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm15154-201ENSMUST00000117590 366 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms