Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sfr1Q8BP27 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Gm27682-201ENSMUST00000183930 110 ntBASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sfr1Q8BP27 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.08□□□□□ -0.31
Sfr1Q8BP27 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sfr1Q8BP27 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Sfr1Q8BP27 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Sfr1Q8BP27 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Mir686-201ENSMUST00000102174 109 ntBASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Sfr1Q8BP27 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms