Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Gm7653-201ENSMUST00000214567 508 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn3Q8BHH8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm10012-201ENSMUST00000078252 192 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn3Q8BHH8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms