Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Gm19163-201ENSMUST00000223313 780 ntBASIC12.66□□□□□ -0.38
Ubp1Q811S7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.66□□□□□ -0.38
Ubp1Q811S7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubp1Q811S7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.65□□□□□ -0.38
Ubp1Q811S7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm12363-201ENSMUST00000122250 668 ntBASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Mir7085-201ENSMUST00000184353 66 ntBASIC12.65□□□□□ -0.38
Ubp1Q811S7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ubp1Q811S7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ubp1Q811S7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms