Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm10434-201ENSMUST00000101158 471 ntBASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm14130-201ENSMUST00000118417 987 ntBASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm26956-201ENSMUST00000182176 986 ntBASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm44069-201ENSMUST00000204898 506 ntBASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm12363-201ENSMUST00000122250 668 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm13316-201ENSMUST00000140537 691 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm13570-201ENSMUST00000140763 309 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm37444-201ENSMUST00000193605 439 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm43378-201ENSMUST00000199336 582 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gm13097-201ENSMUST00000210722 397 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40bQ80W14 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.79□□□□□ -0.04
Prpf40bQ80W14 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm16202-201ENSMUST00000117532 544 ntBASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm27023-201ENSMUST00000182372 285 ntBASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm38317-201ENSMUST00000195564 343 ntBASIC14.78□□□□□ -0.04
Prpf40bQ80W14 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms