Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chd4Q6PDQ2 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.39■□□□□ 0.22
Chd4Q6PDQ2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Chd4Q6PDQ2 Gm37246-201ENSMUST00000192665 835 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm7851-201ENSMUST00000117574 323 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm12857-201ENSMUST00000117678 592 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm11511-201ENSMUST00000118146 540 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd4Q6PDQ2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Gm22133-201ENSMUST00000102082 109 ntBASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Gm12501-201ENSMUST00000119163 529 ntBASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Gm1821-202ENSMUST00000227415 750 ntBASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd4Q6PDQ2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm26286-201ENSMUST00000104166 134 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm16166-201ENSMUST00000118291 787 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm10731-201ENSMUST00000181171 448 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm3508-201ENSMUST00000186012 792 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms