Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.33□□□□□ -0.12
Tpm4Q6IRU2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm7730-201ENSMUST00000212486 454 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm4Q6IRU2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm4Q6IRU2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms