Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm23045-201ENSMUST00000175041 96 ntBASIC11.69□□□□□ -0.54
VcanQ62059 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.69□□□□□ -0.54
VcanQ62059 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.69□□□□□ -0.54
VcanQ62059 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Gm5599-201ENSMUST00000209602 788 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
VcanQ62059 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gm14724-201ENSMUST00000118400 537 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Gm14213-201ENSMUST00000119778 768 ntBASIC11.68□□□□□ -0.54
VcanQ62059 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
VcanQ62059 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.68□□□□□ -0.54
VcanQ62059 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.68□□□□□ -0.54
VcanQ62059 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
VcanQ62059 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.68□□□□□ -0.54
VcanQ62059 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
VcanQ62059 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
VcanQ62059 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gm24891-201ENSMUST00000104391 136 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VcanQ62059 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.68□□□□□ -0.54
VcanQ62059 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
VcanQ62059 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.68□□□□□ -0.54
VcanQ62059 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VcanQ62059 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
VcanQ62059 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm11836-201ENSMUST00000121022 441 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm5870-201ENSMUST00000196461 282 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VcanQ62059 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VcanQ62059 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Gm22133-201ENSMUST00000102082 109 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VcanQ62059 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Gm11783-201ENSMUST00000119549 885 ntBASIC11.67□□□□□ -0.54
VcanQ62059 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.67□□□□□ -0.54
VcanQ62059 Mir6407-201ENSMUST00000184510 101 ntBASIC11.67□□□□□ -0.54
VcanQ62059 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.67□□□□□ -0.54
VcanQ62059 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Gm18968-201ENSMUST00000221319 862 ntBASIC11.67□□□□□ -0.54
VcanQ62059 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
VcanQ62059 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Gm25076-201ENSMUST00000104098 132 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm11949-201ENSMUST00000117640 372 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.67□□□□□ -0.54
VcanQ62059 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.67□□□□□ -0.54
VcanQ62059 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.67□□□□□ -0.54
VcanQ62059 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VcanQ62059 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VcanQ62059 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms