Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Six4Q61321 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.9□□□□□ -0.34
Six4Q61321 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Six4Q61321 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Six4Q61321 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.9□□□□□ -0.34
Six4Q61321 Gm13392-201ENSMUST00000117708 150 ntBASIC12.9□□□□□ -0.34
Six4Q61321 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Six4Q61321 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.9□□□□□ -0.34
Six4Q61321 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Six4Q61321 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Six4Q61321 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm38002-201ENSMUST00000193255 180 ntBASIC12.9□□□□□ -0.34
Six4Q61321 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.9□□□□□ -0.34
Six4Q61321 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.9□□□□□ -0.34
Six4Q61321 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.9□□□□□ -0.34
Six4Q61321 Gm19309-201ENSMUST00000218295 205 ntBASIC12.9□□□□□ -0.34
Six4Q61321 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Six4Q61321 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.9□□□□□ -0.34
Six4Q61321 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Six4Q61321 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.9□□□□□ -0.35
Six4Q61321 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Six4Q61321 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Six4Q61321 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.9□□□□□ -0.35
Six4Q61321 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.89□□□□□ -0.35
Six4Q61321 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.89□□□□□ -0.35
Six4Q61321 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Gm12742-201ENSMUST00000117326 410 ntBASIC12.89□□□□□ -0.35
Six4Q61321 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.89□□□□□ -0.35
Six4Q61321 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Gm18054-201ENSMUST00000207539 555 ntBASIC12.89□□□□□ -0.35
Six4Q61321 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.89□□□□□ -0.35
Six4Q61321 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Six4Q61321 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Six4Q61321 Gm24526-201ENSMUST00000082921 158 ntBASIC12.89□□□□□ -0.35
Six4Q61321 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.89□□□□□ -0.35
Six4Q61321 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Six4Q61321 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Six4Q61321 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.89□□□□□ -0.35
Six4Q61321 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Six4Q61321 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms