Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm29499-201ENSMUST00000189151 486 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm28329-201ENSMUST00000191208 689 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm29171-201ENSMUST00000191397 486 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm13916-201ENSMUST00000117368 628 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm15352-201ENSMUST00000118696 270 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm12516-201ENSMUST00000120819 385 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm17877-201ENSMUST00000192578 814 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.02□□□□□ -0.16
Col11a1Q61245 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a1Q61245 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.02□□□□□ -0.16
Col11a1Q61245 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.02□□□□□ -0.17
Col11a1Q61245 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col11a1Q61245 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col11a1Q61245 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a1Q61245 Gm22920-201ENSMUST00000102175 109 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm13182-201ENSMUST00000122241 312 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm3150-201ENSMUST00000166418 204 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm37299-201ENSMUST00000193951 826 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm17889-201ENSMUST00000198410 598 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm1848-201ENSMUST00000120711 789 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.01□□□□□ -0.17
Col11a1Q61245 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col11a1Q61245 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a1Q61245 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms