Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm18968-201ENSMUST00000221319 862 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm23675-201ENSMUST00000157311 125 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Col12a1Q60847 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm43184-201ENSMUST00000197247 542 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.3□□□□□ -0.44
Col12a1Q60847 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm14193-201ENSMUST00000105067 153 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm26368-201ENSMUST00000157826 118 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm43186-201ENSMUST00000198130 824 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm18367-201ENSMUST00000176139 600 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm29410-201ENSMUST00000188383 694 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.29□□□□□ -0.44
Col12a1Q60847 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.29□□□□□ -0.44
Col12a1Q60847 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col12a1Q60847 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm6390-201ENSMUST00000215034 589 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms